plasmids ID

  • https://github.com/phac-nml/mob-suite
  • https://github.com/apcamargo/genomad
  • https://github.com/BU-ISCIII/plasmidID
  • https://github.com/santirdnd/COPLA

comparative plasmids analysis

  • https://gitlab.com/sirarredondo/mge-cluster
  • https://github.com/wtmatlock/plasmid-network-analysis
  • https://github.com/iqbal-lab-org/pling
  • https://github.com/apcamargo/pyleiden
  • https://github.com/phac-nml/genomic_address_service
  • https://github.com/AbeelLab/SHIP